Site-specific labelling of proteins with a lanthanide binding tag attached to an unnatural amino acid for the generation of pseudocontact shifts (#172)
Paramagnetic labels have emerged as a powerful tool for structural studies of proteins and protein-ligand complexes. In particular, pseudocontact shifts (PCS) induced by paramagnetic lanthanide ions are easy to measure in NMR spectra and provide long-range structural information up to about 40 Å.12 To generate useful PCS data, however, the lanthanide tag must be attached to the protein site-specifically and with minimal mobility of the metal ion.
While most of the traditional lanthanide tags rely on single cysteine residues for site-specific attachment to proteins, a more generally applicable method employs unnatural amino acids. We used an orthogonal suppressor-tRNA/aminoacyl-tRNA synthetase pair developed by the group of P. G. Schultz for site-specific incorporation of p-azido-phenylalanine (AzF) into different target proteins.3 Subsequently, the AzF residue was reacted with a lanthanide-binding tag in a Cu(I)-catalyzed cycloaddition reaction.4 We show that sizeable PCSs can be generated in this way using lanthanide complexes of an alkyne derivative of nitrilotriacetic acid, which is a relatively small tag.
- Otting, G. (2008) Prospects for lanthanides in structural biology by NMR. J. Biomol. NMR 42, 1–9.
- Otting, G. (2010) Protein NMR using paramagnetic ions. Annu. Rev. Biophys. 39, 387–405.
- Wang, L. and Schultz, P. G. (2004) Expanding the genetic code. Angew. Chem. Int. Ed. 44, 34–66.
- Loh, C. T., Ozawa, K., Tuck, K. L., Barlow, N., Huber, T., Otting, G. and Graham, B. (2013) Lanthanide tags for site-specific ligation to an unnatural amino acid and generation of pseudocontact shifts in proteins. Bioconjugate Chem. 24, 260-268.